Running HWRF on normal PCs

Hi there,

I am using HWRF on a normal PC, with configuration of 8 CPUs and 24GB Ram. I am trying to run IRMA example. However, it fails in running ghosts. I am wondering if you could help me to solve this issue. In rsl_error, no error comes, and this is the rsl_out log:

taskid: 0 hostname: localhost.localdomain
 Ntasks in X            4 , ntasks in Y            4
WRF V4.0 MODEL
 *************************************
 Parent domain
 ids,ide,jds,jde            1         390           1         780
 ims,ime,jms,jme           -4         104          -4         202
 ips,ipe,jps,jpe            1          97           1         195
 *************************************
DYNAMICS OPTION: nmm dyncore
   alloc_space_field: domain            1 ,              863411760  bytes allocated
  wrf main: calling open_r_dataset for wrfinput
  med_initialdata_input: calling input_input
  mminlu = 'USGS'
   NetCDF error: NetCDF: Attribute not found
   NetCDF error in ext_pnc_get_dom_ti.code INTEGER, line          84  Element GWD_OPT
   NetCDF error: NetCDF: Attribute not found
   NetCDF error in ext_pnc_get_dom_ti.code INTEGER, line          84  Element SF_URBAN_PHYSICS
Timing for processing wrfinput file (stream 0) for domain        1:    5.27028 elapsed seconds
Guessing coupling timestep from d01's dt/3 and d02's nphs and ntrack...
dtc=dt*nphs*ntrack = 360.000=10.000*6*6
 FORECAST BEGINS  0 GMT  0/ 0/   0
Fill REFL_10CM with -35 dBZ
  Grid  1: filling tornado genesis data with zeros
Grid 1 is resetting swath data.
Grid 1 is resetting wind sustainment timer.
  Request update to area of interest in start_domain_nmm.
zeroing grid%cwm
  Initialize DKU3D and DKT3D to 0.
zeroing grid%q2
INIT:  INITIALIZED ARRAYS FOR CLEAN START
    start_nmm TSTART=  0.0000000E+00
    start_nmm TPREC=   385.0000
    start_nmm THEAT=   385.0000
    start_nmm TCLOD=   385.0000
    start_nmm TRDSW=   385.0000
    start_nmm TRDLW=   385.0000
    start_nmm TSRFC=   385.0000
    start_nmm PCPFLG= F
    restrt= F  nest= F
    grid%pdtop=   13640.89      grid%pt=   1000.000
Bounds: ip=1,97 jp=1,195 myi=1,97 myj=1,195
  Set E grid locations for PHY_INIT.
INPUT LandUse = "USGS"
 LANDUSE TYPE = "USGS" FOUND          33  CATEGORIES           2  SEASONS WATER CATEGORY =           16  SNOW CATEGORY =           24
Climatological albedo is used instead of table values
  Do not have ozone.  Must read it in.
  Master rank reads ozone.
  Broadcast ozone to other ranks.
INITIALIZE THREE Noah LSM RELATED TABLES
 LANDUSE TYPE = USGS FOUND          27  CATEGORIES
 INPUT SOIL TEXTURE CLASSIFICATION = STAS
 SOIL TEXTURE CLASSIFICATION = STAS FOUND          19  CATEGORIES
  WARNING: F_ICE_PHY,F_RAIN_PHY AND F_RIMEF_PHY IS REINITIALIZED
 open ETAMPNEW_DATA.expanded_rain, in fer_hires
Initializng moist(:,:,:, Qv) from q
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 computing grid%f_ice
 computing f_rain
Timing for  Timing for start_domain on d           1:    4.81449 elapsed seconds
 *************************************
 Nesting domain
 ids,ide,jds,jde            1         316           1         630
 ims,ime,jms,jme           -4          90          -4         168
 ips,ipe,jps,jpe            1          79           1         157
 INTERMEDIATE domain
 ids,ide,jds,jde          165         275         221         436
 ims,ime,jms,jme          160         202         216         285
 ips,ipe,jps,jpe          163         192         219         275
 *************************************
d01 2017-09-05_09:00:00  alloc_space_field: domain            2 ,              629802424  bytes allocated
  -     nest%id    =            2
  -   parent%id    =            2
  - i_parent_start =          167
  - j_parent_start =          223
  - parent%wbd0    =   -38.41200
  - parent%sbd0    =   -38.51100
  - nest%wbd0      =   -5.543999
  - nest%sbd0      =   -16.53300
  - nest%dx        =   3.3000000E-02
  - nest%dy        =   3.3000000E-02
  - nest%cen_lat   =    23.00000
  - nest%cen_lon   =   -62.80000
d01 2017-09-05_09:00:00 Nest d 2 entering nest_terrain
d01 2017-09-05_09:00:00 NEST_TERRAIN MASTER PROCESS
d01 2017-09-05_09:00:00 terrain_for: need to read terrain
d01 2017-09-05_09:00:00 terrain_for: returning
d01 2017-09-05_09:00:00 call wrf_global_to_patch_real in nest_terrain
d01 2017-09-05_09:00:00 back from wrf_global_to_patch_real in nest_terrain
d01 2017-09-05_09:00:00 Call fast smoother (smooth_terrain)
Timing for Nest d2 nest_terrain:    3.90934 elapsed seconds
d01 2017-09-05_09:00:00 ensure_space_field: calling alloc_space_field because a grid was not allocated.
d01 2017-09-05_09:00:00  alloc_space_field: domain            2 ,               55251560  bytes allocated
 TIME STEP ON DOMAIN           2 ==   10.00000
 IDS,IDE ON DOMAIN           2 ==           1         316
 NEW CHANGE  -5.000000      4.9771057E-03  -10.00000
Guessing coupling timestep from d02 settings...
dtc=dt*nphs*ntrack = 360.000=10.000*6*6
 FORECAST BEGINS  0 GMT  0/ 0/   0
Fill REFL_10CM with -35 dBZ
d01 2017-09-05_09:00:00 Grid  2: filling tornado genesis data with zeros
Grid 2 is resetting swath data.
Grid 2 is resetting wind sustainment timer.
d01 2017-09-05_09:00:00 Request update to area of interest in start_domain_nmm.
zeroing grid%cwm
d01 2017-09-05_09:00:00 Initialize DKU3D and DKT3D to 0.
zeroing grid%q2
INIT:  INITIALIZED ARRAYS FOR CLEAN START
d01 2017-09-05_09:00:00   start_nmm TSTART=  0.0000000E+00
d01 2017-09-05_09:00:00   start_nmm TPREC=   385.0000
d01 2017-09-05_09:00:00   start_nmm THEAT=   385.0000
d01 2017-09-05_09:00:00   start_nmm TCLOD=   385.0000
d01 2017-09-05_09:00:00   start_nmm TRDSW=   385.0000
d01 2017-09-05_09:00:00   start_nmm TRDLW=   385.0000
d01 2017-09-05_09:00:00   start_nmm TSRFC=   385.0000
d01 2017-09-05_09:00:00   start_nmm PCPFLG= F
d01 2017-09-05_09:00:00   restrt= F  nest= F
d01 2017-09-05_09:00:00   grid%pdtop=   13640.89      grid%pt=   1000.000
Bounds: ip=1,79 jp=1,157 myi=1,79 myj=1,157
d01 2017-09-05_09:00:00 Set E grid locations for PHY_INIT.
INPUT LandUse = "USGS"
 LANDUSE TYPE = "USGS" FOUND          33  CATEGORIES           2  SEASONS WATER CATEGORY =           16  SNOW CATEGORY =            0
Climatological albedo is used instead of table values
d01 2017-09-05_09:00:00 Do not have ozone.  Must read it in.
d01 2017-09-05_09:00:00 Master rank reads ozone.
d01 2017-09-05_09:00:00 Broadcast ozone to other ranks.
INITIALIZE THREE Noah LSM RELATED TABLES
 LANDUSE TYPE = USGS FOUND          27  CATEGORIES
 INPUT SOIL TEXTURE CLASSIFICATION = STAS
 SOIL TEXTURE CLASSIFICATION = STAS FOUND          19  CATEGORIES
d01 2017-09-05_09:00:00 WARNING: F_ICE_PHY,F_RAIN_PHY AND F_RIMEF_PHY IS REINITIALIZED
 open ETAMPNEW_DATA.expanded_rain, in fer_hires
Initializng moist(:,:,:, Qv) from q
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 summing moist(:,:,:,i_m) into cwm array
 computing grid%f_ice
 computing f_rain
Timing for  Timing for start_domain on d           2:    2.69779 elapsed seconds
d01 2017-09-05_09:00:00 med_analysis_out: opening wrfanl_d02_2017-09-05_09_00_00 for writing
d01 2017-09-05_09:00:00  Warning 2 DRYRUNS 1 VARIABLE (TRACK_GUESS_LAT) in wrf_io.F90, line        2412
Timing for Writing restart for domain        2:   32.44402 elapsed seconds
d01 2017-09-05_09:00:00 open_hist_w : opening wrfout_d01_2017-09-05_09_00_00 for writing.
d01 2017-09-05_09:00:00  Warning 2 DRYRUNS 1 VARIABLE (TRACK_GUESS_LAT) in wrf_io.F90, line        2412
d01 2017-09-05_09:00:00  med_hist_out: opened wrfout_d01_2017-09-05_09_00_00 as DATASET=HISTORY
Timing for Writing wrfout_d01_2017-09-05_09_00_00 for domain        1:   20.49200 elapsed seconds
d01 2017-09-05_09:00:00 mminlu = 'USGS'
Timing for processing lateral boundary for domain        1:    1.67268 elapsed seconds
 Tile Strategy is not specified. Assuming 1D-Y
WRF TILE   1 IS      1 IE     97 JS      1 JE    195
WRF NUMBER OF TILES =   1
  its=           1  ite=          97
  jts=           1  jte=         195
  kts=           1  kte=          74
d01 2017-09-05_09:00:00 Reset and recalculate area of interest.
d01 2017-09-05_09:00:00 grid 1: 3265 of 303031 points (1.08%) are in area of interest.
ZEROED OUT PRECIP/RUNOFF ARRAYS
ZEROED OUT SFC EVAP/FLUX ARRAYS
ZEROED OUT ACCUMULATED SHORTWAVE FLUX ARRAYS
ZEROED OUT ACCUMULATED LONGWAVE FLUX ARRAYS
ZEROED OUT ACCUMULATED CLOUD FRACTION ARRAYS
ZEROED OUT ACCUMULATED LATENT HEATING ARRAYS
RESET MAX/MIN TEMPERATURES
RESET MAX/MIN RH
d01 2017-09-05_09:00:00 Top of Radiation Driver
d01 2017-09-05_09:00:00 Have o3rad
 Cd ===          99 F  0.2000000               1
 PBL==          99 F  0.2000000               1
GWD usage currently may be problematic for some cases - use at own risk
  0:  deltim= 0.60000E+02  rdeltim= 0.16667E-01
  0:  kpblmin=  1  kpblmax= 21
  0:  helvmin= 0.00000E+00  helvmax= 0.12672E+04
  0:  hanglmin=-0.13892E+01  hanglmax= 0.12235E+01
  0:  hslopmin= 0.00000E+00  hslopmax= 0.12050E+00
  0:  hanismin= 0.00000E+00  hanismax= 0.88125E+00
  0:  hstdvmin= 0.00000E+00  hstdvmax= 0.45168E+03
  0:  hcnvxmin= 0.00000E+00  hcnvxmax= 0.25150E+02
  0:  hasywmin=-0.10000E+01  hasywmax= 0.68225E+00
  0:  hasysmin=-0.10000E+01  hasysmax= 0.81950E+00
  0:  hasyswmin=-0.10000E+01  hasyswmax= 0.59900E+00
  0:  hasynwmin=-0.10000E+01  hasynwmax= 0.64775E+00
  0:  hlenwmin= 0.00000E+00  hlenwmax= 0.45875E+00
  0:  hlensmin= 0.00000E+00  hlensmax= 0.54625E+00
  0:  hlenswmin= 0.00000E+00  hlenswmax= 0.54750E+00
  0:  hlennwmin= 0.00000E+00  hlennwmax= 0.54625E+00
  0:  zsmin=-0.14419E+02  zsmax= 0.14211E+04
 DESAS ==          99 F   50.00000               1
 SHSAS ==          99 F   50.00000               1
  grid%ntsd=           0  solve_tim=   130.0431      sum_tim=   84.44581
       pdte_tim=     0.034914 pct=  0.041%
       adve_tim=     1.008414 pct=  1.194%
       vtoa_tim=     0.037390 pct=  0.044%
       vadz_tim=     0.045930 pct=  0.054%
       hadz_tim=     0.003855 pct=  0.005%
        eps_tim=     0.031548 pct=  0.037%
       vad2_tim=     0.231669 pct=  0.274%
       had2_tim=     0.591404 pct=  0.700%
  radiation_tim=     2.064386 pct=  2.445%
     rdtemp_tim=     0.005796 pct=  0.007%
      turbl_tim=     3.155533 pct=  3.737%
     cltend_tim=     0.009776 pct=  0.012%
     cucnvc_tim=     3.325856 pct=  3.938%
   gsmdrive_tim=     1.143538 pct=  1.354%
     adjppt_tim=     0.000000 pct=  0.000%
      hdiff_tim=     0.062516 pct=  0.074%
      bocoh_tim=     0.006553 pct=  0.008%
      pfdht_tim=     1.545150 pct=  1.830%
      ddamp_tim=     0.040858 pct=  0.048%
      bocov_tim=     0.001150 pct=  0.001%
  uv_h_to_v_tim=     0.068824 pct=  0.082%
       exch_tim=     3.775004 pct=  4.470%
       diag_tim=     0.018238 pct=  0.022%
    tornado_tim=     0.000000 pct=  0.000%
        sst_tim=    67.116516 pct= 79.479%
    cplstep_tim=     0.120535 pct=  0.143%
        wav_tim=     0.000020 pct=  0.000%
       flux_tim=     0.000434 pct=  0.001%
     hifreq_tim=     0.000000 pct=  0.000%
 LAYER= 1 MAX= 0.230794E+03 MIN= 0.222880E+03
          MEAN= 0.226972E+03 STDEV= 0.183594E+01 RMS= 0.226979E+03
 LAYER= 2 MAX= 0.227179E+03 MIN= 0.218451E+03
          MEAN= 0.222957E+03 STDEV= 0.216913E+01 RMS= 0.222968E+03
 LAYER= 3 MAX= 0.225503E+03 MIN= 0.214275E+03
          MEAN= 0.219629E+03 STDEV= 0.288223E+01 RMS= 0.219648E+03
 LAYER= 4 MAX= 0.224082E+03 MIN= 0.208856E+03
          MEAN= 0.216777E+03 STDEV= 0.359718E+01 RMS= 0.216807E+03
 LAYER= 5 MAX= 0.223400E+03 MIN= 0.206859E+03
          MEAN= 0.214688E+03 STDEV= 0.410145E+01 RMS= 0.214727E+03
 LAYER= 6 MAX= 0.223226E+03 MIN= 0.204874E+03
          MEAN= 0.213126E+03 STDEV= 0.437207E+01 RMS= 0.213170E+03
 LAYER= 7 MAX= 0.223273E+03 MIN= 0.203331E+03
          MEAN= 0.211584E+03 STDEV= 0.486719E+01 RMS= 0.211640E+03
 LAYER= 8 MAX= 0.223656E+03 MIN= 0.202693E+03
          MEAN= 0.210005E+03 STDEV= 0.561765E+01 RMS= 0.210080E+03
 LAYER= 9 MAX= 0.224170E+03 MIN= 0.200238E+03
          MEAN= 0.208293E+03 STDEV= 0.652367E+01 RMS= 0.208395E+03
 LAYER=10 MAX= 0.224645E+03 MIN= 0.197858E+03
          MEAN= 0.206547E+03 STDEV= 0.740572E+01 RMS= 0.206680E+03
 LAYER=11 MAX= 0.225213E+03 MIN= 0.195718E+03
          MEAN= 0.204951E+03 STDEV= 0.820592E+01 RMS= 0.205115E+03
 LAYER=12 MAX= 0.225686E+03 MIN= 0.190890E+03
          MEAN= 0.203922E+03 STDEV= 0.870564E+01 RMS= 0.204108E+03
 LAYER=13 MAX= 0.226081E+03 MIN= 0.187623E+03
          MEAN= 0.203647E+03 STDEV= 0.882455E+01 RMS= 0.203838E+03
 LAYER=14 MAX= 0.226306E+03 MIN= 0.190897E+03
          MEAN= 0.204079E+03 STDEV= 0.863937E+01 RMS= 0.204262E+03
 LAYER=15 MAX= 0.226609E+03 MIN= 0.194252E+03
          MEAN= 0.205095E+03 STDEV= 0.820161E+01 RMS= 0.205259E+03
 LAYER=16 MAX= 0.227075E+03 MIN= 0.196251E+03
          MEAN= 0.206589E+03 STDEV= 0.755991E+01 RMS= 0.206727E+03
 LAYER=17 MAX= 0.227486E+03 MIN= 0.199059E+03
          MEAN= 0.208441E+03 STDEV= 0.675942E+01 RMS= 0.208551E+03
 LAYER=18 MAX= 0.227929E+03 MIN= 0.203420E+03
          MEAN= 0.210508E+03 STDEV= 0.585204E+01 RMS= 0.210589E+03
 LAYER=19 MAX= 0.228986E+03 MIN= 0.206223E+03
          MEAN= 0.212665E+03 STDEV= 0.492659E+01 RMS= 0.212722E+03
 LAYER=20 MAX= 0.230249E+03 MIN= 0.207899E+03
          MEAN= 0.214893E+03 STDEV= 0.404896E+01 RMS= 0.214931E+03
 LAYER=21 MAX= 0.231287E+03 MIN= 0.209328E+03
          MEAN= 0.217222E+03 STDEV= 0.326807E+01 RMS= 0.217246E+03
 LAYER=22 MAX= 0.233271E+03 MIN= 0.210782E+03
          MEAN= 0.219675E+03 STDEV= 0.270902E+01 RMS= 0.219691E+03
 LAYER=23 MAX= 0.237279E+03 MIN= 0.212366E+03
          MEAN= 0.222265E+03 STDEV= 0.251036E+01 RMS= 0.222279E+03
 LAYER=24 MAX= 0.240869E+03 MIN= 0.214064E+03
          MEAN= 0.224988E+03 STDEV= 0.275862E+01 RMS= 0.225005E+03
 LAYER=25 MAX= 0.244144E+03 MIN= 0.214987E+03
          MEAN= 0.227830E+03 STDEV= 0.333029E+01 RMS= 0.227854E+03
 LAYER=26 MAX= 0.247182E+03 MIN= 0.216836E+03
          MEAN= 0.230785E+03 STDEV= 0.394910E+01 RMS= 0.230819E+03
 LAYER=27 MAX= 0.250043E+03 MIN= 0.217818E+03
          MEAN= 0.233842E+03 STDEV= 0.444533E+01 RMS= 0.233884E+03
 LAYER=28 MAX= 0.252713E+03 MIN= 0.220002E+03
          MEAN= 0.236975E+03 STDEV= 0.476011E+01 RMS= 0.237023E+03
 LAYER=29 MAX= 0.255263E+03 MIN= 0.222822E+03
          MEAN= 0.240128E+03 STDEV= 0.494682E+01 RMS= 0.240179E+03
 LAYER=30 MAX= 0.257710E+03 MIN= 0.226063E+03
          MEAN= 0.243260E+03 STDEV= 0.506233E+01 RMS= 0.243312E+03
 LAYER=31 MAX= 0.260093E+03 MIN= 0.228060E+03
          MEAN= 0.246342E+03 STDEV= 0.514512E+01 RMS= 0.246396E+03
 LAYER=32 MAX= 0.262386E+03 MIN= 0.229977E+03
          MEAN= 0.249327E+03 STDEV= 0.518809E+01 RMS= 0.249381E+03
 LAYER=33 MAX= 0.264579E+03 MIN= 0.231927E+03
          MEAN= 0.252186E+03 STDEV= 0.517826E+01 RMS= 0.252239E+03
 LAYER=34 MAX= 0.266652E+03 MIN= 0.233960E+03
          MEAN= 0.254932E+03 STDEV= 0.513482E+01 RMS= 0.254983E+03
 LAYER=35 MAX= 0.268644E+03 MIN= 0.236063E+03
          MEAN= 0.257562E+03 STDEV= 0.506939E+01 RMS= 0.257612E+03
 LAYER=36 MAX= 0.270589E+03 MIN= 0.238252E+03
          MEAN= 0.260081E+03 STDEV= 0.499849E+01 RMS= 0.260129E+03
 LAYER=37 MAX= 0.272495E+03 MIN= 0.240521E+03
          MEAN= 0.262513E+03 STDEV= 0.494932E+01 RMS= 0.262560E+03
 LAYER=38 MAX= 0.274319E+03 MIN= 0.242840E+03
          MEAN= 0.264884E+03 STDEV= 0.493633E+01 RMS= 0.264930E+03
 LAYER=39 MAX= 0.276070E+03 MIN= 0.245199E+03
          MEAN= 0.267213E+03 STDEV= 0.494954E+01 RMS= 0.267259E+03
 LAYER=40 MAX= 0.277804E+03 MIN= 0.247527E+03
          MEAN= 0.269492E+03 STDEV= 0.497311E+01 RMS= 0.269538E+03
 LAYER=41 MAX= 0.279512E+03 MIN= 0.249719E+03
          MEAN= 0.271683E+03 STDEV= 0.499115E+01 RMS= 0.271729E+03
 LAYER=42 MAX= 0.281220E+03 MIN= 0.251559E+03
          MEAN= 0.273762E+03 STDEV= 0.501006E+01 RMS= 0.273808E+03
 LAYER=43 MAX= 0.282942E+03 MIN= 0.253194E+03
          MEAN= 0.275698E+03 STDEV= 0.504060E+01 RMS= 0.275744E+03
 LAYER=44 MAX= 0.285193E+03 MIN= 0.254870E+03
          MEAN= 0.277426E+03 STDEV= 0.508539E+01 RMS= 0.277473E+03
 LAYER=45 MAX= 0.287011E+03 MIN= 0.256454E+03
          MEAN= 0.278989E+03 STDEV= 0.515085E+01 RMS= 0.279037E+03
 LAYER=46 MAX= 0.288330E+03 MIN= 0.257871E+03
          MEAN= 0.280441E+03 STDEV= 0.520745E+01 RMS= 0.280489E+03
 LAYER=47 MAX= 0.290251E+03 MIN= 0.259173E+03
          MEAN= 0.281792E+03 STDEV= 0.524417E+01 RMS= 0.281841E+03
 LAYER=48 MAX= 0.292232E+03 MIN= 0.260405E+03
          MEAN= 0.283022E+03 STDEV= 0.528923E+01 RMS= 0.283072E+03
 LAYER=49 MAX= 0.294001E+03 MIN= 0.261403E+03
          MEAN= 0.284125E+03 STDEV= 0.534703E+01 RMS= 0.284175E+03
 LAYER=50 MAX= 0.295471E+03 MIN= 0.262457E+03
          MEAN= 0.285122E+03 STDEV= 0.540835E+01 RMS= 0.285173E+03
 LAYER=51 MAX= 0.296696E+03 MIN= 0.263504E+03
          MEAN= 0.286029E+03 STDEV= 0.546030E+01 RMS= 0.286081E+03
 LAYER=52 MAX= 0.297644E+03 MIN= 0.264308E+03
          MEAN= 0.286829E+03 STDEV= 0.549801E+01 RMS= 0.286881E+03
 LAYER=53 MAX= 0.298335E+03 MIN= 0.265025E+03
          MEAN= 0.287482E+03 STDEV= 0.553262E+01 RMS= 0.287535E+03
 LAYER=54 MAX= 0.298864E+03 MIN= 0.265643E+03
          MEAN= 0.288038E+03 STDEV= 0.559179E+01 RMS= 0.288092E+03
 LAYER=55 MAX= 0.299344E+03 MIN= 0.266168E+03
          MEAN= 0.288538E+03 STDEV= 0.565521E+01 RMS= 0.288593E+03
 LAYER=56 MAX= 0.299817E+03 MIN= 0.266543E+03
          MEAN= 0.289003E+03 STDEV= 0.569762E+01 RMS= 0.289059E+03
 LAYER=57 MAX= 0.300037E+03 MIN= 0.266575E+03
          MEAN= 0.289447E+03 STDEV= 0.574151E+01 RMS= 0.289504E+03
 LAYER=58 MAX= 0.300590E+03 MIN= 0.266916E+03
          MEAN= 0.289895E+03 STDEV= 0.578583E+01 RMS= 0.289952E+03
 LAYER=59 MAX= 0.301329E+03 MIN= 0.267421E+03
          MEAN= 0.290365E+03 STDEV= 0.582232E+01 RMS= 0.290423E+03
 LAYER=60 MAX= 0.302013E+03 MIN= 0.267889E+03
          MEAN= 0.290827E+03 STDEV= 0.586532E+01 RMS= 0.290887E+03
 LAYER=61 MAX= 0.302596E+03 MIN= 0.268146E+03
          MEAN= 0.291271E+03 STDEV= 0.591817E+01 RMS= 0.291331E+03
 LAYER=62 MAX= 0.303048E+03 MIN= 0.268340E+03
          MEAN= 0.291696E+03 STDEV= 0.597892E+01 RMS= 0.291757E+03
 LAYER=63 MAX= 0.303535E+03 MIN= 0.268522E+03
          MEAN= 0.292104E+03 STDEV= 0.604092E+01 RMS= 0.292166E+03
 LAYER=64 MAX= 0.303958E+03 MIN= 0.268693E+03
          MEAN= 0.292478E+03 STDEV= 0.608866E+01 RMS= 0.292542E+03
 LAYER=65 MAX= 0.304240E+03 MIN= 0.268859E+03
          MEAN= 0.292786E+03 STDEV= 0.610575E+01 RMS= 0.292849E+03
 LAYER=66 MAX= 0.304394E+03 MIN= 0.269013E+03
          MEAN= 0.293061E+03 STDEV= 0.611903E+01 RMS= 0.293125E+03
 LAYER=67 MAX= 0.304332E+03 MIN= 0.269104E+03
          MEAN= 0.293339E+03 STDEV= 0.614247E+01 RMS= 0.293403E+03
 LAYER=68 MAX= 0.304078E+03 MIN= 0.269180E+03
          MEAN= 0.293583E+03 STDEV= 0.616562E+01 RMS= 0.293648E+03
 LAYER=69 MAX= 0.304085E+03 MIN= 0.269248E+03
          MEAN= 0.293784E+03 STDEV= 0.618915E+01 RMS= 0.293849E+03
 LAYER=70 MAX= 0.304105E+03 MIN= 0.269315E+03
          MEAN= 0.293951E+03 STDEV= 0.621733E+01 RMS= 0.294017E+03
 LAYER=71 MAX= 0.304094E+03 MIN= 0.269386E+03
          MEAN= 0.294091E+03 STDEV= 0.625283E+01 RMS= 0.294158E+03
 LAYER=72 MAX= 0.304104E+03 MIN= 0.269457E+03
          MEAN= 0.294208E+03 STDEV= 0.629525E+01 RMS= 0.294275E+03
 LAYER=73 MAX= 0.304111E+03 MIN= 0.269530E+03
          MEAN= 0.294313E+03 STDEV= 0.634026E+01 RMS= 0.294382E+03
 LAYER=74 MAX= 0.304154E+03 MIN= 0.269616E+03
          MEAN= 0.294436E+03 STDEV= 0.637835E+01 RMS= 0.294505E+03
d01 2017-09-05_09:00:00 COMPUTING MSLP OVER THE PARENT DOMAIN
d01 2017-09-05_09:00:00 TG extrema: max(wind)=45.99 max(w)=.00 min(w)=.00  max(zhel)=.0000 min(zhel)=.0000
 *************************************
 Nesting domain
 ids,ide,jds,jde            1         500           1        1000
 ims,ime,jms,jme           -4         135          -4         261
 ips,ipe,jps,jpe            1         125           1         250
 INTERMEDIATE domain
 ids,ide,jds,jde           73         244         145         483
 ims,ime,jms,jme           68         126         140         239
 ips,ipe,jps,jpe           71         116         143         229
 *************************************
d02 2017-09-05_09:00:00  alloc_space_field: domain            3 ,             1425808236  bytes allocated
  -     nest%id    =            3
  -   parent%id    =            3
  - i_parent_start =           75
  - j_parent_start =          147
  - parent%wbd0    =   -5.543999
  - parent%sbd0    =   -16.53300
  - nest%wbd0      =  -0.6599989
  - nest%sbd0      =   -11.71500
  - nest%dx        =   1.1000000E-02
  - nest%dy        =   1.1000000E-02
  - nest%cen_lat   =    23.00000
  - nest%cen_lon   =   -62.80000
 

I should add that the netcdf errors, come into the WRF run of outer and inner domains, but do not lead to the failure of simulation. I guessed that it causes by the limitation of the system configuration. So I tried to change its namelist. It passed init_gdas and init_gfs successfully, but faced with another error in init_bdy. Should I change the namelist?

Here is the last lines of init_gdas log:

===================================================================================
=   BAD TERMINATION OF ONE OF YOUR APPLICATION PROCESSES
=   PID 16112 RUNNING AT localhost.localdomain
=   EXIT CODE: 9
=   CLEANING UP REMAINING PROCESSES
=   YOU CAN IGNORE THE BELOW CLEANUP MESSAGES
===================================================================================
   Intel(R) MPI Library troubleshooting guide:
      https://software.intel.com/node/561764
===================================================================================
03/15 14:26:56.476 hwrf.fgat.t201709051500/wrfghost (run.py:398) INFO:   - exit status 9
03/15 14:26:56.834 hwrf.fgat.t201709051500/wrfghost (fcsttask.py:934) INFO: wrf: exit status 9
03/15 14:26:57.135 hwrf.fgat.t201709051500/wrfghost (fileop.py:923) INFO: rsl.out.0000: read 184 lines
03/15 14:26:57.154 hwrf.fgat.t201709051500/wrfghost (fcsttask.py:938) ERROR: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
03/15 14:26:57Z NONAME-hwrf.fgat.t201709051500/wrfghost: ERROR:  wrf: did not see SUCCESS COMPLETE in rsl.out.0000
03/15 14:26:57.241 hwrf.fgat.t201709051500/wrfghost (fcsttask.py:984) CRITICAL: fgat.t201709051500/wrfghost failed: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
Traceback (most recent call last):
  File "/home2/xcyclone/source/HWRF/hwrfrun/ush/hwrf/fcsttask.py", line 979, in run
    self.run_exe()
  File "/home2/xcyclone/source/HWRF/hwrfrun/ush/hwrf/fcsttask.py", line 939, in run_exe
    raise RealNMMError(msg)
RealNMMError: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
03/15 14:26:57Z NONAME-hwrf.fgat.t201709051500/wrfghost: CRITICAL:  fgat.t201709051500/wrfghost failed: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
03/15 14:26:58.059 hwrf.fgat.t201709051500/wrfghost (cd.py:186) WARNING: /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/fgat.t201709051500/ghost: leaving temp directory due to exception
03/15 14:26:58.074 hwrf.fgat.t201709051500/wrfghost (cd.py:188) INFO: /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/fgat.t201709051500/ghost: listing current directory (/home2/xcyclone/HWRF/hwrfrun/2017090512/11L/fgat.t201709051500/ghost) via ls -l
17090512'
$EXPT='hwrfrun'
$F90='ifort'
$MPICXX='/home2/xcyclone/source/Package/bin/mpicxx'
$FFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
$HWRF='1'
$RUN_ENVIR='EMC'
$SUBEXPT='hwrfrun'
$WRF_NMM_CORE='1'
$FIXhwrf='/home2/xcyclone/source/HWRF/hwrfrun/fix'
$MPIF90='/home2/xcyclone/source/Package/bin/mpifort'
$INTEL_PYTHONHOME='/opt/intel/debugger_2018/python/intel64/'
$MPIF77='/home2/xcyclone/source/Package/bin/mpif77'
$cyc='12'
$SELINUX_ROLE_REQUESTED=''
$LAPACK_PATH='/home2/xcyclone/source/Package/lapack-3.9.0'
$TBBROOT='/opt/intel/compilers_and_libraries_2018.1.148/linux/tbb'
$RUNhwrf='hwrfrun'
$QT_GRAPHICSSYSTEM_CHECKED='1'
$NLSPATH='/opt/intel/compilers_and_libraries_2018.1.148/linux/compiler/lib/intel64/locale/%l_%t/%N:/opt/intel/compilers_and_libraries_2018.1.148/linux/mkl/lib/intel64_lin/locale/%l_%t/%N:/opt/intel/debugger_2018/gdb/intel64/share/locale/%l_%t/%N'
$CENLO='-62.8'
$KDEDIRS='/usr'
$SSH_TTY='/dev/pts/0'
$HOMEhwrf='/home2/xcyclone/source/HWRF/hwrfrun'
$GDB_CROSS='/opt/intel/debugger_2018/gdb/intel64/bin/gdb-ia'
$CPATH='/opt/intel/compilers_and_libraries_2018.1.148/linux/ipp/include:/opt/intel/compilers_and_libraries_2018.1.148/linux/mkl/include:/opt/intel/compilers_and_libraries_2018.1.148/linux/pstl/include:/opt/intel/compilers_and_libraries_2018.1.148/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.1.148/linux/tbb/include:/opt/intel/compilers_and_libraries_2018.1.148/linux/daal/include'
$PERL_MB_OPT='--install_base /root/perl5'
$COMOUT='/home2/xcyclone/HWRF/hwrfrun/com/2017090512/11L'
$PNETCDF_QUILT='1'
$FGATINV='3'
$PERL_MM_OPT='INSTALL_BASE=/root/perl5'
$WHERE_AM_I='jet'
$SSH_CLIENT='172.17.136.128 1636 22'
$LOGNAME='xcyclone'
$OCSTATFILE='/home2/xcyclone/HWRF/hwrfrun/com/2017090512/11L/storm1.ocean_status'
$PATH=':.:/opt/intel/compilers_and_libraries_2018.1.148/linux/bin/intel64:/opt/intel/compilers_and_libraries_2018.1.148/linux/mpi/intel64/bin:/root/perl5/bin:/home2/xcyclone/Hindcast/solveComileWW3/mpich-install/bin:/usr/local/bin:/usr/lib64/qt-3.3/bin:/home2/xcyclone/perl5/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/home2/xcyclone/.local/bin:/home2/xcyclone/bin:/opt/intel/compilers_and_libraries_2018.1.148/linux/bin:/home2/xcyclone/source/HWRF/hwrfrun/nwport/util/exec'
$DATA='/home2/xcyclone/HWRF/hwrfrun/2017090512/11L'
$WRFIO_NCD_LARGE_FILE_SUPPORT='1'
$TERM='xterm'
$storm_num='1'
$PSTLROOT='/opt/intel/compilers_and_libraries_2018.1.148/linux/pstl'
$CDSCRUB='/home2/xcyclone/HWRF'
$CC='icc'
$EMCGRAPHICS='NO'
$CYCLE='2017090512'
$PERL_LOCAL_LIB_ROOT=':/home2/xcyclone/perl5:/root/perl5'
$PARMhwrf='/home2/xcyclone/source/HWRF/hwrfrun/parm'
$I_MPI_ROOT='/opt/intel/compilers_and_libraries_2018.1.148/linux/mpi'
$INIT_MODEL='GDAS1'
$GSID03='YES'
$MPICH_F90='/home2/xcyclone/source/Package/bin/mpifort'
$SPINUP_DATA='/home2/xcyclone/HWRF/hwrfrun/2017090512/11L/OCEAN/'
$DAALROOT='/opt/intel/compilers_and_libraries_2018.1.148/linux/daal'
$INIT_PARTS='3dvar'
$GDBSERVER_MIC='/opt/intel/debugger_2018/gdb/targets/intel64/x200/bin/gdbserver'
$OLDPWD='/home2/xcyclone/source/HWRF/hwrfrun/wrappers'
$CENLA='23.0'
$HISTCONTROL='ignoredups'
$PWD='/home2/xcyclone/HWRF/hwrfrun/2017090512/11L'
$CFLAGS='-O3 -xHost -ip -no-prec-div -static-intel'
('    ---------- /////////////        ', <Pipeline id=0x7f45bda4b110 in=None out=None err=None>)
('    ----------         ', 9)
-rwxr-xr-x 1 root xcyclone     118068 Wed Nov 29 18:53:43 2017 README.namelist
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0001
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0000
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0003
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0002
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0005
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0004
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0007
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0006
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0009
-rw-r--r-- 1 root     root        173 Mon Mar 15 14:19:18 2021 rsl.error.0008
-rwxr-xr-x 1 root xcyclone       3043 Wed Nov 29 18:53:42 2017 termvels.asc
-rwxr-xr-x 1 root xcyclone     748503 Wed Nov 29 18:53:43 2017 tr67t85
-rwxr-xr-x 1 root xcyclone       3042 Wed Nov 29 18:53:42 2017 capacity.asc
-rwxr-xr-x 1 root xcyclone    1498368 Wed Nov 29 18:53:42 2017 RRTM_DATA_DBL
-rwxr-xr-x 1 root xcyclone     748503 Wed Nov 29 18:53:43 2017 tr49t67
-rwxr-xr-x 1 root xcyclone     847552 Wed Nov 29 18:53:42 2017 RRTMG_LW_DATA
lrwxrwxrwx 1 root     root         95 Mon Mar 15 14:17:50 2021 geo_nmm_nest.l02.nc -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/wps/geo_nmm_nest.l02.nc
-rwxr-xr-x 1 root xcyclone      18208 Wed Nov 29 18:53:42 2017 CAM_AEROPT_DATA
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:43 2017 CLM_EXT_ICE_DFS_DATA
lrwxrwxrwx 1 root     root         88 Mon Mar 15 14:17:50 2021 fort.65 -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/realinit/fort.65
lrwxrwxrwx 1 root     root         95 Mon Mar 15 14:17:50 2021 geo_nmm_nest.l01.nc -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/wps/geo_nmm_nest.l01.nc
-rwxr-xr-x 1 root xcyclone      65756 Wed Nov 29 18:53:42 2017 gribmap.txt
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:34 2021 rsl.out.0009
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:34 2021 rsl.out.0008
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:33 2021 rsl.out.0005
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:33 2021 rsl.out.0004
-rwxr-xr-x 1 root xcyclone       1152 Wed Nov 29 18:53:42 2017 aerosol_lon.formatted
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:34 2021 rsl.out.0006
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:34 2021 rsl.out.0001
-rw-r--r-- 1 root     root      20417 Mon Mar 15 14:26:38 2021 rsl.out.0000
-rwxr-xr-x 1 root xcyclone       3042 Wed Nov 29 18:53:43 2017 bulkradii.asc_s_0_03_0_9
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:34 2021 rsl.out.0002
-rwxr-xr-x 1 root xcyclone        736 Wed Nov 29 18:53:42 2017 aerosol_lat.formatted
-rwxr-xr-x 1 root xcyclone     206228 Wed Nov 29 18:53:43 2017 coeff_p.asc
-rwxr-xr-x 1 root xcyclone        261 Wed Nov 29 18:53:42 2017 GENPARM.TBL
-rw-r--r-- 1 root     root       3906 Mon Mar 15 14:17:50 2021 fort.12
-rwxr-xr-x 1 root xcyclone        192 Wed Nov 29 18:53:43 2017 aerosol_plev.formatted
-rw-r--r-- 1 root     root         21 Mon Mar 15 14:17:50 2021 domain.center
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:42 2017 CLM_ALB_ICE_DFS_DATA
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:43 2017 CLM_ASM_ICE_DFS_DATA
-rwxr-xr-x 1 root xcyclone      11188 Wed Nov 29 18:53:43 2017 URBPARM.TBL
-rwxr-xr-x 1 root xcyclone   20580056 Wed Nov 29 18:53:43 2017 CAM_ABS_DATA
-rwxr-xr-x 1 root xcyclone        955 Wed Nov 29 18:53:42 2017 CAMtr_volume_mixing_ratio.A1B
-rwxr-xr-x 1 root xcyclone      30626 Wed Nov 29 18:53:42 2017 grib2map.tbl
-rwxr-xr-x 1 root xcyclone      42838 Wed Nov 29 18:53:43 2017 CAMtr_volume_mixing_ratio.RCP4.5
lrwxrwxrwx 1 root     root        110 Mon Mar 15 14:17:50 2021 met_nmm.d01.2017-09-05_15_00_00.nc -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/wps/met_nmm.d01.2017-09-05_15_00_00.nc
-rw-r--r-- 1 root     root 5323747616 Mon Mar 15 14:18:55 2021 wrfanl_d02_2017-09-05_15_00_00
-rwxr-xr-x 1 root xcyclone       4227 Wed Nov 29 18:53:43 2017 README.tslist
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:43 2017 CLM_ALB_ICE_DRC_DATA
-rwxr-xr-x 1 root xcyclone      48000 Wed Nov 29 18:53:42 2017 co2_trans
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:33 2021 rsl.out.0007
-rw-r--r-- 1 root     root       3910 Mon Mar 15 14:17:50 2021 namelist.input
-rwxr-xr-x 1 root xcyclone     680368 Wed Nov 29 18:53:42 2017 RRTMG_SW_DATA
-rw-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0011
-rw-r--r-- 1 root     root        241 Mon Mar 15 14:21:33 2021 rsl.out.0003
lrwxrwxrwx 1 root     root         93 Mon Mar 15 14:17:50 2021 wrfinput_d01 -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/realinit/wrfinput_d01
-rwxr-xr-x 1 root xcyclone      44247 Wed Nov 29 18:53:42 2017 MPTABLE.TBL
-rwxr-xr-x 1 root xcyclone        144 Wed Nov 29 18:53:42 2017 README.fix
-rwxr-xr-x 1 root xcyclone      43016 Wed Nov 29 18:53:42 2017 kernels_z.asc
-rwxr-xr-x 1 root xcyclone       3950 Wed Nov 29 18:53:42 2017 constants.asc
-rwxr-xr-x 1 root xcyclone     702587 Wed Nov 29 18:53:42 2017 kernels.asc_s_0_03_0_9
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:42 2017 CLM_ASM_ICE_DRC_DATA
lrwxrwxrwx 1 root     root         91 Mon Mar 15 14:17:50 2021 wrfbdy_d01 -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/realinit/wrfbdy_d01
-rwxr-xr-x 1 root xcyclone     148571 Wed Nov 29 18:53:42 2017 CLM_EXT_ICE_DRC_DATA
-rwxr-xr-x 1 root xcyclone    1694976 Wed Nov 29 18:53:43 2017 RRTMG_LW_DATA_DBL
-rw-r--r-- 1 root     root         21 Mon Mar 15 14:17:50 2021 storm.center
-rw-r--r-- 1 root     root      80813 Mon Mar 15 14:17:52 2021 namelist.output
-rwxr-xr-x 1 root xcyclone     543744 Wed Nov 29 18:53:42 2017 ozone.formatted
-rwxr-xr-x 1 root xcyclone      43400 Wed Nov 29 18:53:42 2017 ETAMPNEW_DATA.expanded_rain
-rwxr-xr-x 1 root xcyclone      29820 Wed Nov 29 18:53:43 2017 LANDUSE.TBL
-rwxr-xr-x 1 root xcyclone        536 Wed Nov 29 18:53:42 2017 ozone_lat.formatted
lrwxrwxrwx 1 root     root         90 Mon Mar 15 14:17:50 2021 geo_nmm.d01.nc -> /home2/xcyclone/HWRF/hwrfrun/2017090512/11L/intercom/fgat.t201709051500/wps/geo_nmm.d01.nc
-rwxr-xr-x 1 root xcyclone       4419 Wed Nov 29 18:53:43 2017 SOILPARM.TBL
-rwxr-xr-x 1 root xcyclone      68448 Wed Nov 29 18:53:43 2017 CLM_TAU_DATA
-rwxr-xr-x 1 root xcyclone      68448 Wed Nov 29 18:53:42 2017 CLM_DRDSDT0_DATA
-rwxr-xr-x 1 root xcyclone     749248 Wed Nov 29 18:53:42 2017 RRTM_DATA
-rwxr-xr-x 1 root xcyclone      42838 Wed Nov 29 18:53:42 2017 CAMtr_volume_mixing_ratio.RCP6
-rw-r--r-- 1 root     root         26 Mon Mar 15 14:17:50 2021 set_nest
-rwxr-xr-x 1 root xcyclone   29772567 Wed Nov 29 18:53:42 2017 aerosol.formatted
-rwxr-xr-x 1 root xcyclone      22986 Wed Nov 29 18:53:43 2017 VEGPARM.TBL
-rwxr-xr-x 1 root xcyclone       8550 Wed Nov 29 18:53:42 2017 URBPARM_UZE.TBL
-rwxr-xr-x 1 root xcyclone      30200 Wed Nov 29 18:46:06 2017 eta_micro_lookup.dat
-rwxr-xr-x 1 root xcyclone      68448 Wed Nov 29 18:53:42 2017 CLM_KAPPA_DATA
-rwxr-xr-x 1 root xcyclone       3042 Wed Nov 29 18:53:42 2017 bulkdens.asc_s_0_03_0_9
-rwxr-xr-x 1 root xcyclone     748503 Wed Nov 29 18:53:42 2017 tr49t85
-rwxr-xr-x 1 root xcyclone       9398 Wed Nov 29 18:53:43 2017 coeff_q.asc
-rwxr-xr-x 1 root xcyclone       3042 Wed Nov 29 18:53:42 2017 masses.asc
-rwxr-xr-x 1 root xcyclone        955 Wed Nov 29 18:53:43 2017 CAMtr_volume_mixing_ratio.A2
-rwxr-xr-x 1 root xcyclone      42838 Wed Nov 29 18:53:42 2017 CAMtr_volume_mixing_ratio.RCP8.5
-rwxr-xr-x 1 root xcyclone    1360572 Wed Nov 29 18:53:43 2017 RRTMG_SW_DATA_DBL
-rw-r--r-- 1 root     root 2830386956 Mon Mar 15 14:19:16 2021 wrfout_d01_2017-09-05_15_00_00
-rwxr-xr-x 1 root xcyclone      35288 Wed Nov 29 18:53:43 2017 CCN_ACTIVATE.BIN
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:33 2021 rsl.out.0012
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:33 2021 rsl.out.0013
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:34 2021 rsl.out.0010
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:33 2021 rsl.out.0011
-rwxr-xr-x 1 root xcyclone      60296 Wed Nov 29 18:53:42 2017 ETAMPNEW_DATA_DBL
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:34 2021 rsl.out.0014
-rw-r--r-- 1 root     root        242 Mon Mar 15 14:21:33 2021 rsl.out.0015
-rw-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0012
-rw-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0013
-rw-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0010
-rwxr-xr-x 1 root xcyclone      30200 Wed Nov 29 18:53:43 2017 ETAMPNEW_DATA
-rw03/15 14:26:59.019 hwrf.fgat.t201709051500/wrfghost (cd.py:139) INFO: chdir to old directory /home2/xcyclone/HWRF/hwrfrun/2017090512/11L
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_utime -             time in user mode = 1440.89
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_stime -           time in system mode = 372.076
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_maxrss -     maximum resident set size = 0
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_ixrss -            shared memory size = 0
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_idrss -          unshared memory size = 0
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_isrss -           unshared stack size = 0
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_minflt - page faults not requiring I/O = 1.0136e+07
03/15 14:26:59.300 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_majflt -     page faults requiring I/O = 1438
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_nswap -           number of swap outs = 0
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:  ru_inblock -        block input operations = 2.58092e+06
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:  ru_oublock -       block output operations = 1.59268e+07
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_msgsnd -                 messages sent = 0
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_msgrcv -             messages received = 0
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO: ru_nsignals -              signals received = 0
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:    ru_nvcsw -    voluntary context switches = 50899
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO:   ru_nivcsw -  involuntary context switches = 2.68634e+08
03/15 14:26:59.301 hwrf.fgat.t201709051500 (rusage.py:260) INFO: ru_walltime -                wallclock time = 550.025
03/15 14:26:59.320 jlog (exhwrf_init.py:96) CRITICAL: HWRF init is aborting: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
Traceback (most recent call last):
  File "/home2/xcyclone/source/HWRF/hwrfrun/scripts/exhwrf_init.py", line 94, in <module>
    main()
  File "/home2/xcyclone/source/HWRF/hwrfrun/scripts/exhwrf_init.py", line 79, in main
    init.run_init_after_anl()
  File "/home2/xcyclone/source/HWRF/hwrfrun/ush/hwrf/init.py", line 584, in run_init_after_anl
    self.runghost.run()
  File "/home2/xcyclone/source/HWRF/hwrfrun/ush/hwrf/fcsttask.py", line 979, in run
    self.run_exe()
  File "/home2/xcyclone/source/HWRF/hwrfrun/ush/hwrf/fcsttask.py", line 939, in run_exe
    raise RealNMMError(msg)
RealNMMError: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
03/15 14:26:59Z NONAME-CRITICAL:  HWRF init is aborting: wrf: did not see SUCCESS COMPLETE in rsl.out.0000
-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0014
-rw-r--r-- 1 root     root        174 Mon Mar 15 14:19:18 2021 rsl.error.0015
-rwxr-xr-x 1 root xcyclone        485 Wed Nov 29 18:53:43 2017 wind-turbine-1.tbl
-rwxr-xr-x 1 root xcyclone      86408 Wed Nov 29 18:53:42 2017 ETAMPNEW_DATA.expanded_rain_DBL
-rwxr-xr-x 1 root xcyclone        708 Wed Nov 29 18:53:43 2017 ozone_plev.formatted

Thanks in advance for your time and help.